In systems neuroscience, datasets are multimodal and include data-streams of various origins:...
Pynapple: a light-weight python package for neural data analysis (Part 2/2)
In systems neuroscience, datasets are multimodal and include data-streams of various origins: multichannel electrophysiology, 1- or 2-p calcium imaging, behavior, etc. Often, the exact nature of data streams are unique to each lab, if not each project. Analyzing these datasets in an efficient and open way is crucial for collaboration and reproducibility. In this combined webinar and tutorial, Adrien Peyrache and Guillaume Viejo will present Pynapple, a Python-based data analysis pipeline for systems neuroscience. Designed for flexibility and versatility, Pynapple allows users to perform cross-modal neural data analysis via a common programming approach which facilitates easy sharing of both analysis code and data.
GitHub resources:
https://github.com/pynapple-org/pynapple
https://elifesciences.org/articles/85786
Pynapple Webinar Part 2 - Tutorial
Guillaume Viejo will provide an in-depth hands-on demo and tutorial session. This presentation will show how to use Pynapple on a couple of example datasets (electrophysiology and 1-p calcium imaging), how to design project-specific data loaders, and how to structure an analysis pipeline.
